Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase | AMED_RS14075 | Not Available | Positive | 2949597 - 2951393 | 62373.6 |
| methionyl-trna formyltransferase | AMED_RS14080 | Not Available | Positive | 2951743 - 2952669 | 32286.0 |
| rsmb/nop family class i sam-dependent rna methyltransferase | AMED_RS14085 | Not Available | Positive | 2952666 - 2954090 | 50803.3 |
| flavoprotein | AMED_RS14090 | Not Available | Positive | 2954087 - 2954593 | 17655.2 |
| serine hydrolase | AMED_RS14095 | Not Available | Negative | 2954806 - 2955921 | 38409.0 |
| alkaline phosphatase | AMED_RS14100 | Not Available | Negative | 2956024 - 2957418 | 47717.0 |
| response regulator transcription factor | AMED_RS14105 | Not Available | Negative | 2957585 - 2958244 | 23122.2 |
| sensor histidine kinase | AMED_RS14110 | Not Available | Negative | 2958241 - 2959440 | 41297.3 |
| ribulose-phosphate 3-epimerase | AMED_RS14115 | Not Available | Positive | 2959563 - 2960234 | 23201.7 |
| riboflavin synthase | AMED_RS14120 | Not Available | Positive | 2960327 - 2960956 | 21823.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
