Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | AMED_RS14025 | Not Available | Positive | 2938388 - 2939236 | 28374.9 |
| integration host factor, actinobacterial type | AMED_RS14030 | Not Available | Positive | 2939344 - 2939661 | 11561.2 |
| guanylate kinase | AMED_RS14035 | Not Available | Positive | 2939658 - 2940314 | 23884.9 |
| dna-directed rna polymerase subunit omega | AMED_RS14040 | Not Available | Positive | 2940311 - 2940580 | 9849.77 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | AMED_RS14045 | Not Available | Positive | 2940573 - 2941793 | 42641.1 |
| methionine adenosyltransferase | AMED_RS14050 | Not Available | Positive | 2941887 - 2943089 | 42311.1 |
| primosomal protein n' | AMED_RS14055 | Not Available | Positive | 2943179 - 2945278 | 73739.6 |
| hypothetical protein | AMED_RS14060 | Not Available | Positive | 2945328 - 2946194 | 30679.8 |
| coth kinase family protein | AMED_RS14065 | Not Available | Negative | 2946196 - 2947854 | 60077.8 |
| hypothetical protein | AMED_RS14070 | Not Available | Negative | 2948044 - 2949393 | 47111.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
