Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AMED_RS13975 | Not Available | Negative | 2927569 - 2927928 | 12622.5 |
| transcriptional regulator | AMED_RS13980 | Not Available | Negative | 2928125 - 2928613 | 17694.3 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | AMED_RS13985 | Not Available | Positive | 2928862 - 2929476 | 21786.0 |
| aspartate carbamoyltransferase catalytic subunit | AMED_RS13990 | Not Available | Positive | 2929473 - 2930420 | 33285.1 |
| dihydroorotase | AMED_RS13995 | Not Available | Positive | 2930417 - 2931703 | 45268.7 |
| transporter | AMED_RS14000 | Not Available | Positive | 2931703 - 2932197 | 18153.9 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | AMED_RS14005 | Not Available | Positive | 2932194 - 2933315 | 40087.4 |
| aaa family atpase | AMED_RS14010 | Not Available | Positive | 2933312 - 2934484 | 42599.6 |
| duf4276 family protein | AMED_RS14015 | Not Available | Positive | 2934481 - 2935077 | 22620.4 |
| carbamoyl-phosphate synthase large subunit | AMED_RS14020 | Not Available | Positive | 2935077 - 2938391 | 118382.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
