Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | AMED_RS13875 | Not Available | Negative | 2912014 - 2912829 | 28136.8 |
| hpr family phosphocarrier protein | AMED_RS13880 | Not Available | Negative | 2912910 - 2913176 | 8562.29 |
| pts transporter subunit eiic | AMED_RS13885 | Not Available | Negative | 2913215 - 2914447 | 44003.3 |
| gntr family transcriptional regulator | AMED_RS13890 | Not Available | Negative | 2914444 - 2915232 | 28759.3 |
| glucose pts transporter subunit eiib | AMED_RS13895 | Not Available | Positive | 2915475 - 2915714 | 8276.0 |
| pts glucose transporter subunit iia | AMED_RS13900 | Not Available | Positive | 2915711 - 2916166 | 15508.5 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | AMED_RS13905 | Not Available | Negative | 2916299 - 2916736 | 14090.9 |
| hypothetical protein | AMED_RS13910 | Not Available | Positive | 2916842 - 2917210 | 12949.0 |
| sigma-70 family rna polymerase sigma factor | AMED_RS13915 | Not Available | Positive | 2917215 - 2917727 | 18938.5 |
| anti-sigma factor | AMED_RS13920 | Not Available | Positive | 2917724 - 2918383 | 22922.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
