Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | AMED_RS01295 | Not Available | Negative | 267083 - 268666 | 56065.5 |
| abc transporter atp-binding protein | AMED_RS01300 | Not Available | Positive | 268858 - 269664 | 29143.2 |
| abc transporter permease | AMED_RS01305 | Not Available | Positive | 269654 - 270541 | 31869.2 |
| abc transporter substrate-binding protein | AMED_RS01310 | Not Available | Positive | 270543 - 271598 | 37001.5 |
| g1 family glutamic endopeptidase | AMED_RS01315 | Not Available | Positive | 271819 - 272529 | 24659.1 |
| duf1345 domain-containing protein | AMED_RS01320 | Not Available | Negative | 272537 - 273145 | 21827.9 |
| aaa family atpase | AMED_RS01325 | Not Available | Negative | 273237 - 276146 | 102752.0 |
| s1 family peptidase | AMED_RS01330 | Not Available | Positive | 276655 - 277758 | 36810.0 |
| ssga family sporulation/cell division regulator | AMED_RS01335 | Not Available | Negative | 277851 - 278255 | 15047.4 |
| lrp/asnc family transcriptional regulator | AMED_RS01340 | Not Available | Negative | 278453 - 278926 | 17352.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
