Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS13775 | Not Available | Positive | 2890861 - 2892042 | 41849.8 |
| sgnh/gdsl hydrolase family protein | AMED_RS13780 | Not Available | Positive | 2892423 - 2893289 | 30785.3 |
| metallophosphoesterase | AMED_RS13785 | Not Available | Negative | 2893261 - 2893989 | 26064.1 |
| cytochrome p450 | AMED_RS13790 | Not Available | Negative | 2894052 - 2895260 | 44896.2 |
| tetr/acrr family transcriptional regulator | AMED_RS13795 | Not Available | Negative | 2895291 - 2895986 | 25292.8 |
| replication-associated recombination protein a | AMED_RS13800 | Not Available | Positive | 2896129 - 2897505 | 49034.4 |
| voc family protein | AMED_RS13805 | Not Available | Positive | 2897651 - 2898028 | 14160.7 |
| nad(p)-dependent oxidoreductase | AMED_RS13810 | Not Available | Positive | 2898066 - 2898911 | 28588.1 |
| duf948 domain-containing protein | AMED_RS13815 | Not Available | Positive | 2899396 - 2899782 | 12992.0 |
| hypothetical protein | AMED_RS13820 | Not Available | Positive | 2899779 - 2900084 | 10720.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
