Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iuca/iucc family siderophore biosynthesis protein | AMED_RS13725 | Not Available | Positive | 2875786 - 2877516 | 63506.5 |
| glutamine synthetase | AMED_RS13730 | Not Available | Positive | 2877513 - 2878820 | 45549.1 |
| fad-binding oxidoreductase | AMED_RS13735 | Not Available | Negative | 2879004 - 2880392 | 49843.9 |
| aaa family atpase | AMED_RS13740 | Not Available | Negative | 2880475 - 2883468 | 106111.0 |
| si-specific nad(p)(+) transhydrogenase | AMED_RS13745 | Not Available | Positive | 2883559 - 2884968 | 50430.6 |
| hypothetical protein | AMED_RS13750 | Not Available | Positive | 2884987 - 2885169 | 6388.56 |
| intein-containing rv2578c family radical sam protein | AMED_RS13755 | Not Available | Positive | 2885226 - 2887115 | 68661.2 |
| organomercurial lyase | AMED_RS13760 | Not Available | Positive | 2887271 - 2887873 | 20776.2 |
| aspartate--trna ligase | AMED_RS13765 | Not Available | Positive | 2888059 - 2889834 | 64746.0 |
| duf389 domain-containing protein | AMED_RS13770 | Not Available | Positive | 2889834 - 2890781 | 32296.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
