Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2630 family protein | AMED_RS13580 | Not Available | Positive | 2850762 - 2851004 | 9078.5 |
| ycii family protein | AMED_RS13585 | Not Available | Positive | 2851135 - 2851545 | 14884.4 |
| voc family protein | AMED_RS13590 | Not Available | Positive | 2851557 - 2851994 | 15784.1 |
| rna polymerase sigma factor | AMED_RS13595 | Not Available | Positive | 2851998 - 2853140 | 40889.6 |
| alpha/beta hydrolase | AMED_RS13600 | Not Available | Negative | 2853285 - 2854832 | 52983.9 |
| atp-dependent dna ligase | AMED_RS13605 | Not Available | Negative | 2854902 - 2855981 | 40403.2 |
| hypothetical protein | AMED_RS13610 | Not Available | Negative | 2856008 - 2856607 | 21197.9 |
| duf6286 domain-containing protein | AMED_RS13615 | Not Available | Negative | 2856604 - 2857140 | 18868.1 |
| asp23/gls24 family envelope stress response protein | AMED_RS13620 | Not Available | Negative | 2857143 - 2857487 | 11992.6 |
| hypothetical protein | AMED_RS47970 | Not Available | Negative | 2857484 - 2857660 | 5858.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
