Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoporphyrinogen oxidase | AMED_RS13480 | Not Available | Positive | 2832078 - 2833478 | 47102.9 |
| hydrogen peroxide-dependent heme synthase | AMED_RS13485 | Not Available | Positive | 2833536 - 2834228 | 26374.2 |
| coa transferase | AMED_RS13490 | Not Available | Positive | 2834228 - 2835565 | 47054.9 |
| hypothetical protein | AMED_RS13495 | Not Available | Negative | 2835709 - 2836047 | 12637.3 |
| duf692 domain-containing protein | AMED_RS13500 | Not Available | Negative | 2836044 - 2836844 | 28780.5 |
| tigr04222 domain-containing membrane protein | AMED_RS13505 | Not Available | Negative | 2836837 - 2837754 | 30086.5 |
| tigr04222 domain-containing membrane protein | AMED_RS13510 | Not Available | Negative | 2837821 - 2838735 | 30082.4 |
| peptide-methionine (r)-s-oxide reductase msrb | AMED_RS13515 | Not Available | Negative | 2838810 - 2839247 | 16073.8 |
| hypothetical protein | AMED_RS13520 | Not Available | Negative | 2839267 - 2839572 | 10929.0 |
| serine/threonine-protein kinase | AMED_RS13525 | Not Available | Negative | 2839626 - 2841296 | 57917.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
