Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allophanate hydrolase | AMED_RS13430 | Not Available | Negative | 2818641 - 2820242 | 54553.2 |
| urea carboxylase | AMED_RS13435 | Not Available | Negative | 2820239 - 2823787 | 125624.0 |
| urea amidolyase associated protein uaap2 | AMED_RS13440 | Not Available | Negative | 2823784 - 2824419 | 22614.7 |
| urea amidolyase associated protein uaap1 | AMED_RS13445 | Not Available | Negative | 2824416 - 2825249 | 29246.1 |
| amino acid permease | AMED_RS13450 | Not Available | Negative | 2825262 - 2826731 | 50627.8 |
| tetr/acrr family transcriptional regulator | AMED_RS13455 | Not Available | Positive | 2826908 - 2827573 | 22821.3 |
| ribonuclease d | AMED_RS13460 | Not Available | Negative | 2827599 - 2828822 | 44319.9 |
| response regulator transcription factor | AMED_RS13465 | Not Available | Negative | 2828921 - 2829637 | 24767.8 |
| duf3000 domain-containing protein | AMED_RS13470 | Not Available | Negative | 2830359 - 2830922 | 20005.8 |
| uroporphyrinogen decarboxylase | AMED_RS13475 | Not Available | Positive | 2831011 - 2832081 | 38104.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
