Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pucr family transcriptional regulator | AMED_RS13380 | Not Available | Positive | 2807095 - 2808564 | 51240.9 |
| response regulator transcription factor | AMED_RS13385 | Not Available | Positive | 2808600 - 2809277 | 24135.0 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS13390 | Not Available | Positive | 2809274 - 2810398 | 40052.4 |
| alpha/beta hydrolase | AMED_RS13395 | Not Available | Negative | 2810517 - 2811617 | 38674.1 |
| twin-arginine translocation signal domain-containing protein | AMED_RS13400 | Not Available | Negative | 2811611 - 2813146 | 55554.0 |
| hypothetical protein | AMED_RS13405 | Not Available | Positive | 2813217 - 2813645 | 15115.4 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | AMED_RS13410 | Not Available | Negative | 2813642 - 2815753 | 75213.5 |
| thiolase family protein | AMED_RS13415 | Not Available | Negative | 2815753 - 2816943 | 41914.3 |
| duf998 domain-containing protein | AMED_RS13420 | Not Available | Negative | 2817129 - 2817758 | 22466.7 |
| hypothetical protein | AMED_RS13425 | Not Available | Negative | 2817818 - 2818609 | 28542.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
