Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent rna methyltransferase | AMED_RS13330 | Not Available | Positive | 2794024 - 2795211 | 41705.5 |
| tigr03086 family metal-binding protein | AMED_RS13335 | Not Available | Positive | 2795244 - 2795807 | 19614.1 |
| aldehyde dehydrogenase family protein | AMED_RS13340 | Not Available | Negative | 2796235 - 2797704 | 51988.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AMED_RS13345 | Not Available | Positive | 2797880 - 2799793 | 67371.5 |
| laci family dna-binding transcriptional regulator | AMED_RS13350 | Not Available | Positive | 2799909 - 2800919 | 36593.4 |
| hypothetical protein | AMED_RS13355 | Not Available | Positive | 2801041 - 2801346 | 11168.0 |
| gamma-aminobutyraldehyde dehydrogenase | AMED_RS13360 | Not Available | Negative | 2801586 - 2802944 | 47986.8 |
| thiamine pyrophosphate-binding protein | AMED_RS13365 | Not Available | Negative | 2802941 - 2804584 | 56644.5 |
| agmatinase | AMED_RS13370 | Not Available | Negative | 2804581 - 2805525 | 33737.9 |
| sodium:solute symporter | AMED_RS13375 | Not Available | Negative | 2805518 - 2806963 | 50546.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
