Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 260746 - 260832 | Not Available |
| patatin-like phospholipase family protein | AMED_RS01250 | Not Available | Negative | 261001 - 261840 | 28608.6 |
| voc family protein | AMED_RS01255 | Not Available | Positive | 261922 - 262356 | 15817.6 |
| duf2277 domain-containing protein | AMED_RS01260 | Not Available | Negative | 262358 - 262639 | 10287.5 |
| ldh family oxidoreductase | AMED_RS01265 | Not Available | Positive | 262740 - 263681 | 32818.8 |
| rna-binding s4 domain-containing protein | AMED_RS01270 | Not Available | Negative | 263678 - 263902 | 7907.44 |
| serine protease | AMED_RS01275 | Not Available | Negative | 263921 - 264721 | 27428.0 |
| sdr family oxidoreductase | AMED_RS01280 | Not Available | Positive | 264877 - 265689 | 28313.9 |
| hypothetical protein | AMED_RS01285 | Not Available | Positive | 265787 - 266425 | 22195.6 |
| response regulator | AMED_RS01290 | Not Available | Negative | 266427 - 267086 | 23841.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
