Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4193 domain-containing protein | AMED_RS13280 | Not Available | Positive | 2786292 - 2786600 | 11203.8 |
| duf3093 domain-containing protein | AMED_RS13285 | Not Available | Negative | 2786752 - 2787234 | 17595.3 |
| dutp diphosphatase | AMED_RS13290 | Not Available | Positive | 2787259 - 2787762 | 17015.2 |
| duf3710 domain-containing protein | AMED_RS13295 | Not Available | Positive | 2787762 - 2788427 | 23565.6 |
| alpha/beta fold hydrolase | AMED_RS13300 | Not Available | Negative | 2788472 - 2789155 | 22806.3 |
| ob-fold nucleic acid binding domain-containing protein | AMED_RS13305 | Not Available | Positive | 2789291 - 2789671 | 13989.7 |
| duf3159 domain-containing protein | AMED_RS13310 | Not Available | Positive | 2789681 - 2790403 | 26433.2 |
| trka family potassium uptake protein | AMED_RS13315 | Not Available | Negative | 2790583 - 2791239 | 23434.1 |
| trka family potassium uptake protein | AMED_RS13320 | Not Available | Negative | 2791236 - 2791949 | 25565.5 |
| apc family permease | AMED_RS13325 | Not Available | Positive | 2791994 - 2794027 | 73189.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
