Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching protein glgx | AMED_RS13230 | Not Available | Positive | 2771012 - 2773159 | 78460.6 |
| maltotransferase domain-containing protein | AMED_RS13235 | Not Available | Positive | 2773521 - 2775503 | 74144.4 |
| maltose alpha-d-glucosyltransferase | AMED_RS13240 | Not Available | Positive | 2775542 - 2777350 | 68311.1 |
| maltokinase n-terminal cap-like domain-containing protein | AMED_RS13245 | Not Available | Positive | 2777356 - 2778735 | 50070.4 |
| 1,4-alpha-glucan branching protein glgb | AMED_RS13250 | Not Available | Positive | 2778732 - 2780939 | 81330.2 |
| hypothetical protein | AMED_RS13255 | Not Available | Positive | 2781117 - 2781509 | 14510.9 |
| rna polymerase sigma factor | AMED_RS13260 | Not Available | Negative | 2781586 - 2782989 | 51695.4 |
| polyphosphate--glucose phosphotransferase | AMED_RS13265 | Not Available | Negative | 2783162 - 2783926 | 26615.8 |
| inositol monophosphatase family protein | AMED_RS13270 | Not Available | Positive | 2783994 - 2784812 | 27912.9 |
| envelope integrity protein cei | AMED_RS13275 | Not Available | Negative | 2785093 - 2785776 | 23505.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
