Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | AMED_RS13180 | Not Available | Positive | 2755839 - 2757020 | 40967.7 |
| hypothetical protein | AMED_RS13185 | Not Available | Negative | 2757176 - 2757355 | 6404.64 |
| dmt family transporter | AMED_RS13190 | Not Available | Positive | 2757698 - 2758501 | 27044.8 |
| glutamine synthetase | AMED_RS13195 | Not Available | Positive | 2759063 - 2760421 | 46960.5 |
| duf6885 family protein | AMED_RS13200 | Not Available | Positive | 2760430 - 2761212 | 26668.9 |
| amino acid permease | AMED_RS13205 | Not Available | Negative | 2761190 - 2762653 | 51161.5 |
| 4-alpha-glucanotransferase | AMED_RS13210 | Not Available | Positive | 2762801 - 2764756 | 70396.0 |
| glycogen debranching protein glgx | AMED_RS13215 | Not Available | Positive | 2764832 - 2766958 | 79315.4 |
| malto-oligosyltrehalose synthase | AMED_RS13220 | Not Available | Positive | 2766955 - 2769231 | 83213.2 |
| malto-oligosyltrehalose trehalohydrolase | AMED_RS13225 | Not Available | Positive | 2769228 - 2770940 | 63032.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
