Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS13130 | Not Available | Negative | 2742461 - 2743078 | 22686.5 |
| sporulation protein | AMED_RS13135 | Not Available | Negative | 2743078 - 2743863 | 28474.3 |
| duf3039 domain-containing protein | AMED_RS13140 | Not Available | Positive | 2743933 - 2744175 | 8641.32 |
| hypothetical protein | AMED_RS13145 | Not Available | Positive | 2744354 - 2745190 | 30020.3 |
| efflux rnd transporter permease subunit | AMED_RS13150 | Not Available | Negative | 2745318 - 2748458 | 107830.0 |
| yihy/virulence factor brkb family protein | AMED_RS13155 | Not Available | Negative | 2748555 - 2749709 | 41991.8 |
| dead/deah box helicase | AMED_RS13160 | Not Available | Positive | 2749954 - 2751690 | 63239.5 |
| sugar abc transporter substrate-binding protein | AMED_RS13165 | Not Available | Positive | 2752238 - 2753377 | 38305.4 |
| atp-binding cassette domain-containing protein | AMED_RS13170 | Not Available | Positive | 2753570 - 2754343 | 27517.1 |
| sugar abc transporter permease | AMED_RS13175 | Not Available | Positive | 2754364 - 2755827 | 49949.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
