Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiolase domain-containing protein | AMED_RS13030 | Not Available | Negative | 2721349 - 2722512 | 41059.8 |
| thiolase domain-containing protein | AMED_RS13035 | Not Available | Negative | 2722509 - 2723522 | 35708.6 |
| zn-ribbon domain-containing ob-fold protein | AMED_RS13040 | Not Available | Negative | 2723530 - 2724507 | 35554.2 |
| crotonase/enoyl-coa hydratase family protein | AMED_RS13045 | Not Available | Negative | 2724589 - 2725377 | 27726.2 |
| acyl-coa synthetase | AMED_RS13050 | Not Available | Positive | 2725440 - 2727056 | 57811.2 |
| nitronate monooxygenase family protein | AMED_RS13055 | Not Available | Positive | 2727094 - 2728194 | 38574.5 |
| trypsin-like serine protease | AMED_RS13060 | Not Available | Negative | 2728246 - 2729052 | 27290.2 |
| apc family permease | AMED_RS13065 | Not Available | Negative | 2729177 - 2730394 | 40872.0 |
| gntr family transcriptional regulator | AMED_RS13070 | Not Available | Positive | 2730475 - 2731236 | 27718.3 |
| hypothetical protein | AMED_RS13075 | Not Available | Positive | 2731277 - 2731804 | 17523.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
