Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | AMED_RS12980 | Not Available | Negative | 2711551 - 2712615 | 37280.4 |
| m20 family metallopeptidase | AMED_RS12985 | Not Available | Positive | 2712684 - 2713883 | 42170.9 |
| hypothetical protein | AMED_RS12990 | Not Available | Positive | 2713961 - 2714155 | 6773.26 |
| amidohydrolase family protein | AMED_RS12995 | Not Available | Positive | 2714152 - 2715354 | 41745.1 |
| alpha/beta fold hydrolase | AMED_RS13000 | Not Available | Negative | 2715432 - 2716229 | 28310.8 |
| steroid 3-ketoacyl-coa thiolase | AMED_RS13005 | Not Available | Negative | 2716284 - 2717441 | 39525.1 |
| cytochrome p450 | AMED_RS13010 | Not Available | Positive | 2717673 - 2718899 | 46076.5 |
| dienelactone hydrolase family protein | AMED_RS13015 | Not Available | Negative | 2718871 - 2719452 | 20061.7 |
| transglutaminase family protein | AMED_RS13020 | Not Available | Positive | 2719488 - 2720279 | 28328.4 |
| yhjd/yihy/brkb family envelope integrity protein | AMED_RS13025 | Not Available | Positive | 2720326 - 2721348 | 36226.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
