Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS12930 | Not Available | Positive | 2701038 - 2702444 | 46347.3 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS12935 | Not Available | Negative | 2702807 - 2704246 | 52123.4 |
| ferredoxin | AMED_RS12940 | Not Available | Negative | 2704239 - 2704469 | 8429.23 |
| ferric reductase-like transmembrane domain-containing protein | AMED_RS12945 | Not Available | Negative | 2704471 - 2705088 | 22631.9 |
| duf4142 domain-containing protein | AMED_RS12950 | Not Available | Negative | 2705081 - 2705872 | 27795.8 |
| hypothetical protein | AMED_RS12955 | Not Available | Negative | 2705856 - 2706458 | 20909.8 |
| sigma-70 family rna polymerase sigma factor | AMED_RS12960 | Not Available | Positive | 2706699 - 2707259 | 21023.9 |
| zf-hc2 domain-containing protein | AMED_RS12965 | Not Available | Positive | 2707267 - 2708055 | 27135.8 |
| duf1996 domain-containing protein | AMED_RS12970 | Not Available | Positive | 2708332 - 2709738 | 50158.8 |
| sco0930 family lipoprotein | AMED_RS12975 | Not Available | Positive | 2709779 - 2710705 | 30800.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
