Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase reductase subunit | AMED_RS12880 | Not Available | Positive | 2692552 - 2693091 | 19103.7 |
| membrane protein | AMED_RS12885 | Not Available | Positive | 2693220 - 2693819 | 20668.3 |
| smr/muts family protein | AMED_RS12890 | Not Available | Negative | 2693822 - 2694076 | 9822.12 |
| mbl fold metallo-hydrolase | AMED_RS12895 | Not Available | Negative | 2694227 - 2695288 | 38523.8 |
| acyl-coa desaturase | AMED_RS12900 | Not Available | Negative | 2695298 - 2696314 | 37428.5 |
| excinuclease abc subunit uvra | AMED_RS12905 | Not Available | Negative | 2696400 - 2698781 | 84275.9 |
| arac family transcriptional regulator | AMED_RS12910 | Not Available | Negative | 2698818 - 2699075 | 9654.7 |
| voc family protein | AMED_RS12915 | Not Available | Negative | 2699106 - 2699516 | 14996.7 |
| helix-turn-helix transcriptional regulator | AMED_RS12920 | Not Available | Negative | 2699527 - 2699967 | 16364.6 |
| lysr family transcriptional regulator | AMED_RS12925 | Not Available | Negative | 2700015 - 2700905 | 31753.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
