Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin kinase | AMED_RS12830 | Not Available | Negative | 2682433 - 2682885 | 16214.0 |
| maoc/paaz c-terminal domain-containing protein | AMED_RS12835 | Not Available | Negative | 2682936 - 2683787 | 30256.0 |
| ferredoxin--nadp reductase | AMED_RS12840 | Not Available | Negative | 2683798 - 2684832 | 36814.7 |
| hypothetical protein | AMED_RS12845 | Not Available | Negative | 2684825 - 2685082 | 8980.53 |
| rieske 2fe-2s domain-containing protein | AMED_RS12850 | Not Available | Negative | 2685079 - 2686215 | 42960.4 |
| 3-oxosteroid 1-dehydrogenase | AMED_RS12855 | Not Available | Negative | 2686212 - 2687876 | 58874.4 |
| fad-binding protein | AMED_RS12860 | Not Available | Positive | 2688000 - 2689601 | 56722.6 |
| 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase oxygenase subunit | AMED_RS12865 | Not Available | Positive | 2689636 - 2690799 | 42743.6 |
| 4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase | AMED_RS12870 | Not Available | Positive | 2690799 - 2691644 | 30755.8 |
| iron-dependent extradiol dioxygenase hsac | AMED_RS12875 | Not Available | Positive | 2691644 - 2692555 | 33522.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
