Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS01195 | Not Available | Positive | 249806 - 251299 | 50437.3 |
| glycosyltransferase | AMED_RS01200 | Not Available | Negative | 251358 - 252266 | 33802.7 |
| abc transporter atp-binding protein | AMED_RS01205 | Not Available | Negative | 252266 - 253081 | 29739.1 |
| abc transporter permease | AMED_RS01210 | Not Available | Negative | 253085 - 254035 | 34963.2 |
| bacterial proteasome activator family protein | AMED_RS01215 | Not Available | Negative | 254241 - 254822 | 20739.4 |
| cysteine desulfurase-like protein | AMED_RS01220 | Not Available | Positive | 254957 - 256156 | 41828.6 |
| nad(p)h-quinone oxidoreductase | AMED_RS01225 | Not Available | Negative | 256153 - 257130 | 33701.7 |
| m28 family metallopeptidase | AMED_RS01230 | Not Available | Positive | 257212 - 258753 | 52626.8 |
| neutral zinc metallopeptidase | AMED_RS01235 | Not Available | Negative | 258805 - 259731 | 31862.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS01240 | Not Available | Positive | 260239 - 260712 | 18007.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
