Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | AMED_RS12735 | Not Available | Negative | 2659525 - 2659860 | 12376.8 |
| fused isobutyryl-coa mutase/gtpase icmf | AMED_RS12740 | Not Available | Positive | 2659999 - 2663232 | 118409.0 |
| class i sam-dependent methyltransferase | AMED_RS12745 | Not Available | Negative | 2663229 - 2663924 | 24889.3 |
| llm class f420-dependent oxidoreductase | AMED_RS12750 | Not Available | Positive | 2664001 - 2664831 | 30537.3 |
| cholesterol catabolism transcriptional regulator kstr | AMED_RS12755 | Not Available | Negative | 2664840 - 2665466 | 22951.8 |
| acyl-coa dehydrogenase | AMED_RS12760 | Not Available | Positive | 2665609 - 2667663 | 70644.4 |
| dead/deah box helicase | AMED_RS12765 | Not Available | Positive | 2667808 - 2670609 | 100846.0 |
| swim zinc finger family protein | AMED_RS12770 | Not Available | Positive | 2670609 - 2671769 | 41406.2 |
| hypothetical protein | AMED_RS12775 | Not Available | Negative | 2672080 - 2672532 | 16879.5 |
| alpha/beta hydrolase | AMED_RS12780 | Not Available | Negative | 2672726 - 2673961 | 44359.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
