Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS12685 | Not Available | Negative | 2647287 - 2648720 | 49405.6 |
| tetr/acrr family transcriptional regulator | AMED_RS12690 | Not Available | Positive | 2648856 - 2649419 | 20685.8 |
| cation acetate symporter | AMED_RS12695 | Not Available | Negative | 2649439 - 2651031 | 55326.4 |
| duf485 domain-containing protein | AMED_RS12700 | Not Available | Negative | 2651028 - 2651450 | 15859.2 |
| nitrate- and nitrite sensing domain-containing protein | AMED_RS12705 | Not Available | Positive | 2652500 - 2656543 | 139524.0 |
| roadblock/lc7 domain-containing protein | AMED_RS12710 | Not Available | Positive | 2656540 - 2656992 | 15469.7 |
| duf742 domain-containing protein | AMED_RS48620 | Not Available | Positive | 2657000 - 2657716 | 24597.9 |
| atp/gtp-binding protein | AMED_RS12720 | Not Available | Positive | 2657745 - 2658308 | 20489.5 |
| duf899 domain-containing protein | AMED_RS12725 | Not Available | Negative | 2658445 - 2659095 | 24407.6 |
| srpbcc domain-containing protein | AMED_RS12730 | Not Available | Negative | 2659092 - 2659532 | 16149.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
