Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS12640 | Not Available | Negative | 2639798 - 2640415 | 22327.7 |
| acyl-coa dehydrogenase family protein | AMED_RS12645 | Not Available | Positive | 2640511 - 2641662 | 41787.0 |
| caib/baif coa-transferase family protein | AMED_RS12650 | Not Available | Positive | 2641674 - 2642810 | 39283.2 |
| gnat family n-acetyltransferase | AMED_RS12655 | Not Available | Negative | 2642819 - 2643349 | 19847.4 |
| crotonase/enoyl-coa hydratase family protein | AMED_RS12660 | Not Available | Negative | 2643577 - 2644350 | 26435.4 |
| hypothetical protein | AMED_RS47965 | Not Available | Positive | 2644452 - 2644619 | 5974.55 |
| hypothetical protein | AMED_RS12665 | Not Available | Positive | 2644980 - 2645462 | 17423.6 |
| lytic transglycosylase domain-containing protein | AMED_RS12670 | Not Available | Positive | 2645585 - 2646493 | 30425.7 |
| hypothetical protein | AMED_RS12675 | Not Available | Positive | 2646604 - 2646954 | 13275.8 |
| duf3817 domain-containing protein | AMED_RS12680 | Not Available | Positive | 2646968 - 2647309 | 12225.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
