Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 18 protein | AMED_RS12590 | Not Available | Positive | 2627685 - 2628899 | 42026.1 |
| duf2461 domain-containing protein | AMED_RS12595 | Not Available | Positive | 2628953 - 2629618 | 25393.8 |
| pyruvate kinase | AMED_RS12600 | Not Available | Positive | 2629710 - 2631134 | 51033.5 |
| acyl-coa thioesterase ii | AMED_RS12605 | Not Available | Positive | 2631171 - 2632067 | 32891.2 |
| helix-turn-helix transcriptional regulator | AMED_RS12610 | Not Available | Positive | 2632416 - 2633318 | 33238.6 |
| duf397 domain-containing protein | AMED_RS12615 | Not Available | Positive | 2633332 - 2633535 | 6837.91 |
| hypothetical protein | AMED_RS12620 | Not Available | Positive | 2633695 - 2633904 | 7749.18 |
| helix-turn-helix transcriptional regulator | AMED_RS12625 | Not Available | Positive | 2633955 - 2636969 | 107147.0 |
| succinic semialdehyde dehydrogenase | AMED_RS12630 | Not Available | Negative | 2637111 - 2638721 | 56195.2 |
| hypothetical protein | AMED_RS12635 | Not Available | Negative | 2638825 - 2639724 | 30987.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
