Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AMED_RS12540 | Not Available | Positive | 2619341 - 2620102 | 27662.7 |
| polyadenylate-specific 3'-exoribonuclease as | AMED_RS12545 | Not Available | Positive | 2620167 - 2620655 | 18782.1 |
| 3-deoxy-7-phosphoheptulonate synthase | AMED_RS12550 | Not Available | Negative | 2620812 - 2621894 | 38078.5 |
| 6-phosphofructokinase | AMED_RS12555 | Not Available | Positive | 2622178 - 2623203 | 36274.3 |
| cu044_5270 family protein | AMED_RS12560 | Not Available | Negative | 2623255 - 2624127 | 30590.1 |
| rna polymerase sigma factor | AMED_RS12565 | Not Available | Negative | 2624120 - 2624704 | 21180.3 |
| aromatic amino acid ammonia-lyase | AMED_RS12570 | Not Available | Negative | 2624770 - 2626206 | 50483.5 |
| group ii truncated hemoglobin | AMED_RS12575 | Not Available | Negative | 2626241 - 2626723 | 17714.0 |
| helix-turn-helix domain-containing protein | AMED_RS12580 | Not Available | Positive | 2626792 - 2627142 | 13419.1 |
| helix-turn-helix transcriptional regulator | AMED_RS12585 | Not Available | Negative | 2627219 - 2627530 | 11979.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
