Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | AMED_RS12490 | Not Available | Positive | 2611312 - 2612106 | 28733.1 |
| srpbcc family protein | AMED_RS12495 | Not Available | Positive | 2612134 - 2612568 | 16056.3 |
| arsa family atpase | AMED_RS12500 | Not Available | Positive | 2612570 - 2613703 | 39510.9 |
| hypothetical protein | AMED_RS12505 | Not Available | Positive | 2613700 - 2614290 | 20306.8 |
| rok family protein | AMED_RS12510 | Not Available | Positive | 2614306 - 2615244 | 32122.6 |
| hypothetical protein | AMED_RS12515 | Not Available | Positive | 2615470 - 2615757 | 9814.38 |
| nudix domain-containing protein | AMED_RS12520 | Not Available | Positive | 2615770 - 2616612 | 30121.5 |
| glutamate--cysteine ligase | AMED_RS12525 | Not Available | Negative | 2616609 - 2617748 | 42509.7 |
| hypothetical protein | AMED_RS12530 | Not Available | Negative | 2617760 - 2618272 | 17609.8 |
| carboxylesterase | AMED_RS12535 | Not Available | Negative | 2618269 - 2619036 | 27252.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
