Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | AMED_RS12440 | Not Available | Positive | 2599698 - 2600939 | 44170.6 |
| ferritin-like domain-containing protein | AMED_RS12445 | Not Available | Positive | 2601056 - 2602033 | 33994.9 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS12450 | Not Available | Positive | 2602096 - 2603202 | 38576.4 |
| laci family dna-binding transcriptional regulator | AMED_RS12455 | Not Available | Negative | 2603209 - 2604258 | 36715.9 |
| abc transporter substrate-binding protein | AMED_RS12460 | Not Available | Positive | 2604418 - 2605698 | 45387.8 |
| carbohydrate abc transporter permease | AMED_RS12465 | Not Available | Positive | 2605698 - 2606630 | 34591.3 |
| carbohydrate abc transporter permease | AMED_RS12470 | Not Available | Positive | 2606640 - 2607530 | 31609.2 |
| gh1 family beta-glucosidase | AMED_RS12475 | Not Available | Positive | 2607549 - 2608907 | 50218.6 |
| long-chain fatty acid--coa ligase | AMED_RS12480 | Not Available | Negative | 2608969 - 2610765 | 63896.9 |
| hypothetical protein | AMED_RS12485 | Not Available | Positive | 2610894 - 2611301 | 14975.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
