Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS01145 | Not Available | Positive | 240342 - 240947 | 19681.6 |
| hypothetical protein | AMED_RS01150 | Not Available | Positive | 241037 - 242554 | 53482.0 |
| decaprenylphospho-beta-d-erythro-pentofuranosid- 2-ulose 2-reductase | AMED_RS01155 | Not Available | Negative | 242571 - 243326 | 26310.8 |
| fad-binding oxidoreductase | AMED_RS01160 | Not Available | Negative | 243323 - 244693 | 49904.3 |
| gtra family protein | AMED_RS01165 | Not Available | Positive | 244903 - 245355 | 16247.8 |
| glycosyltransferase | AMED_RS01170 | Not Available | Positive | 245364 - 247283 | 71141.8 |
| hypothetical protein | AMED_RS01175 | Not Available | Negative | 247335 - 247580 | 8378.12 |
| esx secretion-associated protein espg | AMED_RS01180 | Not Available | Positive | 247876 - 248640 | 27769.1 |
| hypothetical protein | AMED_RS01185 | Not Available | Positive | 248771 - 249220 | 15381.1 |
| duf3558 family protein | AMED_RS01190 | Not Available | Positive | 249224 - 249796 | 18684.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
