Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like domain-containing protein | AMED_RS12240 | Not Available | Positive | 2558389 - 2559135 | 27332.2 |
| fmn-dependent nadh-azoreductase | AMED_RS12245 | Not Available | Positive | 2559150 - 2559779 | 22891.1 |
| smr family transporter | AMED_RS12250 | Not Available | Positive | 2559779 - 2559988 | 7310.18 |
| prolyl oligopeptidase family protein | AMED_RS12255 | Not Available | Negative | 2559978 - 2561999 | 74873.4 |
| neutral zinc metallopeptidase | AMED_RS12260 | Not Available | Positive | 2562104 - 2563081 | 34000.8 |
| tigr03086 family metal-binding protein | AMED_RS12265 | Not Available | Negative | 2563074 - 2563646 | 20724.2 |
| plp-dependent aminotransferase family protein | AMED_RS12270 | Not Available | Positive | 2563730 - 2565142 | 50784.1 |
| hypothetical protein | AMED_RS12275 | Not Available | Positive | 2565139 - 2565585 | 16094.8 |
| cbs domain-containing protein | AMED_RS12280 | Not Available | Positive | 2565688 - 2566119 | 15191.4 |
| duf4139 domain-containing protein | AMED_RS12285 | Not Available | Negative | 2566159 - 2567709 | 55038.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
