Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS12190 | Not Available | Negative | 2545201 - 2546454 | 43585.1 |
| transcriptional regulator | AMED_RS12195 | Not Available | Positive | 2546518 - 2547021 | 18436.0 |
| gtpase hflx | AMED_RS12200 | Not Available | Positive | 2547064 - 2548512 | 52482.2 |
| hypothetical protein | AMED_RS12205 | Not Available | Positive | 2548565 - 2549581 | 34736.4 |
| transcriptional repressor lexa | AMED_RS12210 | Not Available | Negative | 2549655 - 2550314 | 23925.8 |
| lysm peptidoglycan-binding domain-containing protein | AMED_RS12215 | Not Available | Positive | 2550673 - 2551137 | 15972.7 |
| transcriptional regulator nrdr | AMED_RS12220 | Not Available | Positive | 2551816 - 2552310 | 18249.4 |
| vitamin b12-dependent ribonucleotide reductase | AMED_RS12225 | Not Available | Positive | 2552341 - 2555154 | 102261.0 |
| hypothetical protein | AMED_RS12230 | Not Available | Negative | 2555223 - 2556563 | 48936.6 |
| nb-arc domain-containing protein | AMED_RS12235 | Not Available | Negative | 2556560 - 2558227 | 60559.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
