Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMED_RS12095 | Not Available | Negative | 2523233 - 2523475 | 8830.92 |
| hypothetical protein | AMED_RS12100 | Not Available | Positive | 2523468 - 2523866 | 14670.1 |
| hypothetical protein | AMED_RS49390 | Not Available | Positive | 2523967 - 2524098 | 4620.49 |
| phosphatase pap2 family protein | AMED_RS49395 | Not Available | Positive | 2524286 - 2526133 | 65003.9 |
| jacalin-like lectin | AMED_RS12110 | Not Available | Positive | 2526130 - 2527455 | 46584.2 |
| protein kinase domain-containing protein | AMED_RS12115 | Not Available | Negative | 2527440 - 2528156 | 24870.6 |
| ricin domain-containing protein | AMED_RS12120 | Not Available | Positive | 2528434 - 2529870 | 51065.6 |
| cellulase family glycosylhydrolase | AMED_RS12125 | Not Available | Positive | 2529951 - 2531702 | 63371.0 |
| hypothetical protein | AMED_RS12130 | Not Available | Positive | 2531886 - 2532212 | 11038.3 |
| tetr/acrr family transcriptional regulator | AMED_RS12135 | Not Available | Negative | 2532237 - 2532902 | 23605.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
