Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yoak family protein | AMED_RS12045 | Not Available | Positive | 2514755 - 2515465 | 23555.1 |
| hypothetical protein | AMED_RS12050 | Not Available | Positive | 2515565 - 2515720 | 5516.68 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS12055 | Not Available | Negative | 2515717 - 2516454 | 25469.3 |
| amino acid abc transporter permease | AMED_RS12060 | Not Available | Negative | 2516530 - 2517390 | 31311.8 |
| amino acid abc transporter permease | AMED_RS12065 | Not Available | Negative | 2517464 - 2518111 | 23087.8 |
| glutamate abc transporter substrate-binding protein | AMED_RS12070 | Not Available | Negative | 2518198 - 2519124 | 32436.5 |
| amino acid abc transporter atp-binding protein | AMED_RS12075 | Not Available | Negative | 2519193 - 2519921 | 26308.3 |
| response regulator transcription factor | AMED_RS12080 | Not Available | Positive | 2520200 - 2520871 | 24087.2 |
| hamp domain-containing sensor histidine kinase | AMED_RS12085 | Not Available | Positive | 2520876 - 2522273 | 49507.5 |
| taxi family trap transporter solute-binding subunit | AMED_RS12090 | Not Available | Negative | 2522270 - 2523196 | 32916.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
