Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | AMED_RS11945 | Not Available | Negative | 2491741 - 2496411 | 165904.0 |
| deor/glpr family dna-binding transcription regulator | AMED_RS11950 | Not Available | Negative | 2496404 - 2497192 | 27923.2 |
| mfs transporter | AMED_RS11955 | Not Available | Negative | 2497164 - 2498504 | 48008.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | AMED_RS11960 | Not Available | Negative | 2498501 - 2499529 | 35997.3 |
| hsp70 family protein | AMED_RS11965 | Not Available | Positive | 2499976 - 2501820 | 64087.3 |
| duf3046 domain-containing protein | AMED_RS11970 | Not Available | Positive | 2501866 - 2502060 | 7067.56 |
| recombinase reca | AMED_RS11975 | Not Available | Positive | 2502300 - 2503346 | 37086.6 |
| regulatory protein recx | AMED_RS11980 | Not Available | Positive | 2503610 - 2504137 | 19761.5 |
| hypothetical protein | AMED_RS11985 | Not Available | Positive | 2504137 - 2504352 | 7898.11 |
| mfs transporter | AMED_RS11990 | Not Available | Negative | 2504380 - 2505642 | 45112.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
