Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | AMED_RS11895 | Not Available | Positive | 2481415 - 2482299 | 32315.8 |
| duf885 domain-containing protein | AMED_RS11900 | Not Available | Positive | 2482404 - 2484092 | 61133.0 |
| dmt family transporter | AMED_RS11905 | Not Available | Positive | 2484457 - 2485326 | 28986.1 |
| gnat family n-acetyltransferase | AMED_RS11910 | Not Available | Negative | 2485345 - 2485917 | 21642.8 |
| ybak/ebsc family protein | AMED_RS11915 | Not Available | Negative | 2485914 - 2486426 | 16759.0 |
| sav_6107 family hepn domain-containing protein | AMED_RS49665 | Not Available | Positive | 2487440 - 2487853 | 14114.0 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS11925 | Not Available | Positive | 2487843 - 2488610 | 27876.8 |
| voc family protein | AMED_RS11930 | Not Available | Positive | 2488670 - 2489401 | 26224.1 |
| gnat family n-acetyltransferase | AMED_RS11935 | Not Available | Positive | 2489612 - 2490673 | 37733.0 |
| peptide deformylase | AMED_RS11940 | Not Available | Negative | 2490676 - 2491176 | 18772.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
