Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS11845 | Not Available | Negative | 2471972 - 2472181 | 7583.06 |
| stk1 family pasta domain-containing ser/thr kinase | AMED_RS11850 | Not Available | Negative | 2472178 - 2474199 | 70943.8 |
| rv2175c family dna-binding protein | AMED_RS11855 | Not Available | Positive | 2474303 - 2474671 | 13144.0 |
| hypothetical protein | AMED_RS48605 | Not Available | Positive | 2475129 - 2475539 | 13608.2 |
| cgnr zinc finger domain-containing protein | AMED_RS11865 | Not Available | Positive | 2475780 - 2476301 | 18287.6 |
| llm class f420-dependent oxidoreductase | AMED_RS11870 | Not Available | Negative | 2476305 - 2477084 | 28623.9 |
| phytoene/squalene synthase family protein | AMED_RS11875 | Not Available | Negative | 2477081 - 2478007 | 33947.9 |
| phytoene desaturase family protein | AMED_RS11880 | Not Available | Negative | 2478004 - 2479476 | 52233.6 |
| polyprenyl synthetase family protein | AMED_RS11885 | Not Available | Negative | 2479478 - 2480569 | 37467.6 |
| organomercurial lyase | AMED_RS11890 | Not Available | Negative | 2480630 - 2481319 | 24930.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
