Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6541 family protein | AMED_RS01095 | Not Available | Negative | 228668 - 229234 | 19251.5 |
| hypothetical protein | AMED_RS01100 | Not Available | Positive | 229502 - 231319 | 62811.4 |
| hypothetical protein | AMED_RS01105 | Not Available | Positive | 231316 - 232794 | 52321.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AMED_RS01110 | Not Available | Positive | 232804 - 233532 | 26752.5 |
| cof-type had-iib family hydrolase | AMED_RS01115 | Not Available | Negative | 233537 - 234337 | 28347.8 |
| llm class flavin-dependent oxidoreductase | AMED_RS01120 | Not Available | Positive | 234434 - 235315 | 32677.5 |
| duf6541 family protein | AMED_RS01125 | Not Available | Negative | 235453 - 237462 | 70935.0 |
| udp-galactopyranose mutase | AMED_RS01130 | Not Available | Positive | 237542 - 238765 | 46712.4 |
| phosphatase pap2 family protein | AMED_RS01135 | Not Available | Positive | 238758 - 239276 | 17794.9 |
| decaprenyl-phosphate phosphoribosyltransferase | AMED_RS01140 | Not Available | Positive | 239273 - 240223 | 34215.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
