Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase subunit beta | AMED_RS11795 | Not Available | Positive | 2457486 - 2458994 | 53860.8 |
| hypothetical protein | AMED_RS11800 | Not Available | Positive | 2459115 - 2462420 | 118406.0 |
| serine protease | AMED_RS11805 | Not Available | Positive | 2462534 - 2463418 | 31083.6 |
| alpha/beta hydrolase | AMED_RS11810 | Not Available | Positive | 2463501 - 2464895 | 49378.5 |
| class ii 3-deoxy-7-phosphoheptulonate synthase | AMED_RS11815 | Not Available | Positive | 2464957 - 2466348 | 50788.8 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS11820 | Not Available | Negative | 2466355 - 2467137 | 26639.6 |
| helix-turn-helix transcriptional regulator | AMED_RS11825 | Not Available | Positive | 2467224 - 2468060 | 30135.2 |
| wax ester/triacylglycerol synthase family o-acyltransferase | AMED_RS11830 | Not Available | Negative | 2468070 - 2469386 | 46013.7 |
| hypothetical protein | AMED_RS11835 | Not Available | Negative | 2469573 - 2470274 | 25591.4 |
| flotillin family protein | AMED_RS11840 | Not Available | Negative | 2470413 - 2471918 | 52689.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
