Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | AMED_RS11745 | Not Available | Positive | 2442713 - 2443279 | 20461.7 |
| peptidoglycan recognition family protein | AMED_RS11750 | Not Available | Positive | 2443327 - 2443983 | 23655.8 |
| hypothetical protein | AMED_RS11755 | Not Available | Negative | 2443988 - 2445271 | 43990.1 |
| glutamine synthetase family protein | AMED_RS11760 | Not Available | Negative | 2445399 - 2446760 | 48039.7 |
| apc family permease | AMED_RS11765 | Not Available | Positive | 2446815 - 2448248 | 48742.2 |
| amidohydrolase family protein | AMED_RS11770 | Not Available | Positive | 2448245 - 2449369 | 40058.0 |
| m20 family metallopeptidase | AMED_RS11775 | Not Available | Positive | 2449366 - 2450538 | 40858.6 |
| prolipoprotein diacylglyceryl transferase | AMED_RS11780 | Not Available | Positive | 2450557 - 2451669 | 39444.3 |
| sdr family oxidoreductase | AMED_RS11785 | Not Available | Negative | 2451855 - 2452640 | 26606.0 |
| glutamate synthase large subunit | AMED_RS11790 | Not Available | Positive | 2452940 - 2457493 | 164104.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
