Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS11600 | Not Available | Positive | 2421659 - 2422522 | 30952.5 |
| imidazole glycerol phosphate synthase subunit hish | AMED_RS11605 | Not Available | Positive | 2422555 - 2423172 | 21941.9 |
| bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase pria | AMED_RS11610 | Not Available | Positive | 2423209 - 2423946 | 25548.1 |
| sdr family oxidoreductase | AMED_RS11615 | Not Available | Negative | 2423943 - 2424380 | 14629.5 |
| metal-dependent hydrolase | AMED_RS48600 | Not Available | Positive | 2424346 - 2424506 | 5551.66 |
| hypothetical protein | AMED_RS11620 | Not Available | Positive | 2424550 - 2424753 | 7416.77 |
| tetr/acrr family transcriptional regulator | AMED_RS11625 | Not Available | Positive | 2424815 - 2425408 | 21706.1 |
| duf1330 domain-containing protein | AMED_RS11630 | Not Available | Positive | 2425467 - 2425808 | 12241.6 |
| gnat family n-acetyltransferase | AMED_RS11635 | Not Available | Positive | 2425856 - 2426332 | 17609.0 |
| ppox class f420-dependent oxidoreductase | AMED_RS11640 | Not Available | Negative | 2426316 - 2426702 | 14108.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
