Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmpl family transporter | AMED_RS11555 | Not Available | Negative | 2413203 - 2415389 | 75281.4 |
| tetr/acrr family transcriptional regulator | AMED_RS11560 | Not Available | Positive | 2415597 - 2416190 | 21016.4 |
| rna 2'-phosphotransferase | AMED_RS11565 | Not Available | Negative | 2416355 - 2416888 | 19371.3 |
| redox-sensitive transcriptional activator soxr | AMED_RS11570 | Not Available | Negative | 2416923 - 2417384 | 16842.1 |
| thiamine pyrophosphate-dependent enzyme | AMED_RS11575 | Not Available | Positive | 2417437 - 2418129 | 24540.2 |
| transketolase family protein | AMED_RS11580 | Not Available | Positive | 2418135 - 2419064 | 32624.9 |
| nudix hydrolase | AMED_RS11585 | Not Available | Positive | 2419075 - 2419500 | 15977.1 |
| nipsnap family protein | AMED_RS11590 | Not Available | Negative | 2419486 - 2420052 | 21138.9 |
| acyl-coa dehydrogenase family protein | AMED_RS11595 | Not Available | Negative | 2420090 - 2421262 | 41820.9 |
| hypothetical protein | AMED_RS47960 | Not Available | Negative | 2421311 - 2421487 | 6582.76 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
