Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS11510 | Not Available | Positive | 2405233 - 2405928 | 24541.7 |
| response regulator transcription factor | AMED_RS11515 | Not Available | Positive | 2405925 - 2406572 | 23382.2 |
| carbon-nitrogen hydrolase family protein | AMED_RS11520 | Not Available | Negative | 2406645 - 2407439 | 27311.2 |
| histidinol dehydrogenase | AMED_RS11525 | Not Available | Positive | 2407524 - 2408849 | 46013.7 |
| histidinol-phosphate transaminase | AMED_RS11530 | Not Available | Positive | 2408846 - 2409946 | 39423.5 |
| imidazoleglycerol-phosphate dehydratase hisb | AMED_RS11535 | Not Available | Positive | 2409943 - 2410542 | 21596.6 |
| mbl fold metallo-hydrolase | AMED_RS11540 | Not Available | Negative | 2410539 - 2411270 | 25251.7 |
| hypothetical protein | AMED_RS47955 | Not Available | Positive | 2411288 - 2411446 | 5261.68 |
| tetr/acrr family transcriptional regulator | AMED_RS11545 | Not Available | Negative | 2411447 - 2412007 | 19877.6 |
| epoxide hydrolase family protein | AMED_RS11550 | Not Available | Positive | 2412046 - 2413086 | 37420.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
