Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS11360 | Not Available | Positive | 2374175 - 2374378 | 7152.47 |
| duf2567 domain-containing protein | AMED_RS11365 | Not Available | Positive | 2374563 - 2375159 | 21118.0 |
| m48 family metallopeptidase | AMED_RS11370 | Not Available | Positive | 2375208 - 2376248 | 37918.0 |
| lon peptidase substrate-binding domain-containing protein | AMED_RS11375 | Not Available | Negative | 2376250 - 2376966 | 26585.9 |
| nudix domain-containing protein | AMED_RS11380 | Not Available | Negative | 2377008 - 2377640 | 23317.1 |
| quinolinate synthase nada | AMED_RS11385 | Not Available | Positive | 2377753 - 2378763 | 35796.6 |
| l-aspartate oxidase | AMED_RS11390 | Not Available | Positive | 2378760 - 2380403 | 55515.9 |
| carboxylating nicotinate-nucleotide diphosphorylase | AMED_RS11395 | Not Available | Positive | 2380400 - 2381293 | 30772.7 |
| s8 family serine peptidase | AMED_RS11400 | Not Available | Positive | 2381381 - 2382544 | 37867.8 |
| hypothetical protein | AMED_RS11405 | Not Available | Negative | 2382723 - 2383073 | 12392.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
