Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | AMED_RS01045 | Not Available | Negative | 219623 - 220579 | 35128.2 |
| degt/dnrj/eryc1/strs aminotransferase family protein | AMED_RS01050 | Not Available | Negative | 220576 - 221682 | 39401.1 |
| udp-n-acetylglucosamine acyltransferase | AMED_RS01055 | Not Available | Positive | 221832 - 222551 | 25211.9 |
| acyl carrier protein | AMED_RS01060 | Not Available | Positive | 222565 - 222837 | 9890.53 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS01065 | Not Available | Positive | 222830 - 223564 | 24571.7 |
| amp-binding protein | AMED_RS01070 | Not Available | Positive | 223561 - 224955 | 48954.7 |
| acyl-protein synthetase | AMED_RS01075 | Not Available | Positive | 224952 - 226004 | 38432.7 |
| acyl-coa reductase | AMED_RS01080 | Not Available | Positive | 226001 - 227245 | 44211.4 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | AMED_RS01085 | Not Available | Positive | 227258 - 228226 | 33867.3 |
| duf6541 family protein | AMED_RS01090 | Not Available | Negative | 228399 - 228671 | 9855.85 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
