Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | AMED_RS11310 | Not Available | Positive | 2361194 - 2362252 | 36564.0 |
| glycosyltransferase family 4 protein | AMED_RS11315 | Not Available | Positive | 2362391 - 2363548 | 41668.3 |
| uridine kinase | AMED_RS11320 | Not Available | Negative | 2363545 - 2364159 | 22194.5 |
| srpbcc domain-containing protein | AMED_RS11325 | Not Available | Positive | 2364224 - 2364637 | 15331.8 |
| cytochrome p450 | AMED_RS11330 | Not Available | Positive | 2364661 - 2365872 | 43714.6 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | AMED_RS11335 | Not Available | Positive | 2365996 - 2367276 | 45127.4 |
| bifunctional sulp family inorganic anion transporter/carbonic anhydrase | AMED_RS11340 | Not Available | Positive | 2367484 - 2369730 | 77510.1 |
| sulp family inorganic anion transporter | AMED_RS11345 | Not Available | Positive | 2369943 - 2372126 | 74988.2 |
| dethiobiotin synthase | AMED_RS11350 | Not Available | Positive | 2372314 - 2373033 | 23946.7 |
| biotin synthase biob | AMED_RS11355 | Not Available | Positive | 2373208 - 2374188 | 35840.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
