Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS11260 | Not Available | Negative | 2351472 - 2351885 | 14684.6 |
| heme-copper oxidase subunit iii | AMED_RS11265 | Not Available | Positive | 2351981 - 2352604 | 22997.3 |
| c-type cytochrome | AMED_RS11270 | Not Available | Positive | 2352671 - 2353489 | 28483.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | AMED_RS11275 | Not Available | Positive | 2353486 - 2354652 | 42830.9 |
| cytochrome bc complex cytochrome b subunit | AMED_RS11280 | Not Available | Positive | 2354649 - 2356331 | 61613.9 |
| ydei/ompd-associated family protein | AMED_RS11285 | Not Available | Negative | 2356387 - 2356569 | 6516.76 |
| lrp/asnc family transcriptional regulator | AMED_RS11290 | Not Available | Negative | 2356566 - 2356847 | 9713.49 |
| dedd exonuclease domain-containing protein | AMED_RS11295 | Not Available | Negative | 2357207 - 2358910 | 60658.9 |
| nyn domain-containing protein | AMED_RS11300 | Not Available | Positive | 2359029 - 2360426 | 49120.2 |
| hypothetical protein | AMED_RS11305 | Not Available | Positive | 2360493 - 2360750 | 9118.92 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
