Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | AMED_RS11165 | Not Available | Positive | 2334185 - 2335288 | 39528.8 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | AMED_RS11170 | Not Available | Negative | 2335401 - 2336477 | 36252.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | AMED_RS11175 | Not Available | Positive | 2336920 - 2337597 | 23984.9 |
| hypothetical protein | AMED_RS11180 | Not Available | Negative | 2337594 - 2338040 | 16368.5 |
| gntr family transcriptional regulator | AMED_RS11185 | Not Available | Positive | 2338179 - 2338928 | 26227.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | AMED_RS11190 | Not Available | Positive | 2338925 - 2339767 | 31387.1 |
| aldo/keto reductase family protein | AMED_RS11195 | Not Available | Negative | 2339845 - 2340834 | 36085.6 |
| hypothetical protein | AMED_RS11200 | Not Available | Negative | 2340893 - 2341108 | 8025.91 |
| duf3043 domain-containing protein | AMED_RS11205 | Not Available | Negative | 2341353 - 2342000 | 24128.9 |
| iron-sulfur cluster assembly accessory protein | AMED_RS11210 | Not Available | Positive | 2342146 - 2342523 | 13498.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
