Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | AMED_RS11115 | Not Available | Negative | 2324363 - 2325736 | 47996.4 |
| hypothetical protein | AMED_RS11120 | Not Available | Positive | 2325919 - 2326263 | 13184.8 |
| gnat family n-acetyltransferase | AMED_RS11125 | Not Available | Negative | 2326260 - 2326712 | 16514.7 |
| smi1/knr4 family protein | AMED_RS11130 | Not Available | Negative | 2326723 - 2327682 | 33782.4 |
| taxi family trap transporter solute-binding subunit | AMED_RS11135 | Not Available | Negative | 2327693 - 2328667 | 33365.1 |
| trap transporter fused permease subunit | AMED_RS11140 | Not Available | Negative | 2328664 - 2330649 | 69698.0 |
| leucyl aminopeptidase | AMED_RS11145 | Not Available | Negative | 2330731 - 2332230 | 51111.3 |
| hypothetical protein | AMED_RS11150 | Not Available | Positive | 2332340 - 2333188 | 27790.8 |
| duf402 domain-containing protein | AMED_RS11155 | Not Available | Positive | 2333181 - 2333831 | 24593.7 |
| hypothetical protein | AMED_RS11160 | Not Available | Negative | 2333788 - 2334087 | 10288.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
